Historical Infant Gut Microbiome


Select Publications

  • Frese, S. and D. A. Mills.  2015. Should infants cry over spilled milk? Fecal glycomics as an indicator of a healthy infant gut microbiome.  Journal of Pediatric Gastroenterology and Nutrition 60 (6):695-.
  • Subramanian, S., L. Blanton, S. A. Frese, M. Charbonneau, D. A. Mills, and J. I. Gordon.  2015. Cultivating healthy growth and nutrition through the gut microbiota. Cell 161:36-48.
  • Lewis, Z. T., S. M. Totten, J. T. Smilowitz, M. Popovic, E. Parker, D. G. Lemay, M. L. Van Tassell, M. J. Miller, Y. S. Jin,  J. B. German, C. B. Lebrilla and D. A. Mills. 2015. Maternal fucosyltransferase 2 status impacts gut bifidobacterial communities of breastfed infants. Microbiome 3:13.
  • Pacheco, A. R., D. Barile, M. A. Underwood, D. A. Mills. 2015.  Impact of the milk glycobiome on the neonate gut microbiota. Annual Reviews in Animal Sciences 3: 419-445.
  • Underwood, M. A., J. B. German, C. B. Lebrilla, D. A. Mills. 2015. Bifidobacterium longum subspecies infantis: champion colonizer of the infant gut.  Pediatric Research 77:229-235.
  • German, J. B., J. T. Smilowitz, C. B. Lebrilla, D. A. Mills, S.L. Freeman. 2015. Metabolomics and milk: The development of the microbiota in breast fed infants.  In, S. Kochhar and F.-P. Martin, Eds, Metabonomics and Gut Microbiota in Nutrition and Disease, Springer, New York, NY pp 147-167.
  • De Leoza, M. L. A., K. M. Kalanetra, N. A. Bokulich, J. S. Strum, M. A. Underwood, J. B. German, D. A. Mills, and C. B. Lebrilla.  2015. Human milk glycomics and gut microbial genomics in infant feces shows correlation between human milk oligosaccharides and gut microbiota: A proof-of-concept study. Journal of Proteome Research 14:491–502.
  • Maldonado-Gomez, M. X., Lee, H., Barile, D., Lu, M. and R. W. Hutkins. 2015. Adherence inhibition of enteric pathogens to epithelial cells by bovine colostrum fractions. International Dairy Journal 40, 24-32.
  • Dallas, D. C., Smink, C. J., Robinson, R. C., Tian, T.,  Guerrero, A., Parker, E. A., Smilowitz, J. T., Hettinga, K. A., Underwood, M. A., Lebrilla, C. B., German, J. B. and D. Barile. 2014. Endogenous Human Milk Peptide Release Is Greater after Preterm Birth than Term Birth. The Journal of Nutrition 114.203646. 2014
  • Guerrero, A., Dallas, D. C., Contreras, S., Chee, S., Parker, E. A., Sun, X., Dimapasoc, L., Barile, D., German, J. B., C. B. Lebrilla. 2014. Mechanistic Peptidomics: Factors That Dictate Specificity in the Formation of Endogenous Peptides in Human Milk.  Molecular & Cellular Proteomics 13 (12), 3343-3351.
  • Underwood, M., J. Arriola, C. Gerber, A. Kaveti, K. Kalanetra, A. Kananurak, C. Bevins, D. A. Mills, and B. Dvorak. 2014. Bifidobacterium longum subsp. infantis in experimental necrotizing enterocolitis: alterations in inflammation, innate immune response, and the microbiota.  Pediatric Research 76: 326–333.
  • Huda, M N., Z. Lewis, K. Kalanetra, M. Rashid, S. Ahmad, R. Raqib, F. Qadri, M. A. Underwood, D. A. Mills and C. Stephensen. 2014. Stool microbiota and vaccine responses of infants.  Pediatrics 134:2 e362-e372.
  • Smilowitz, J. T., C. B. Lebrilla, D. A. Mills, J. B. German and S. L. Freeman.  2014. Breast milk oligosaccahrides:  Structure function relationships in the neonate.  Annual Review of Nutrition 34:143-69.
  • Sela, D. A. and D. A. Mills.  (2014). The marriage of nutrigenomics with the microbiome: the case of infant-associated bifidobacteria and milk.  The American Journal of Clinical Nutrition 99:697S-703S.
  • Underwood, M. A., K. M. Kalanetra, N. A. Bokulich, M. Mirmiran, D. Barile, D. J. Tancredi, J. B. German, C. B. Lebrilla and D. A. Mills.  (2014). Prebiotic oligosaccharides in premature infants.   Journal of Pediatric Gastroenterology & Nutrition 58:352-360.
  • Aldredge D.L., Geronimo M.R, Hua S.S., Nwosu C.C., Lebrilla C.B. & Barile D.(2013). Annotation and structural elucidation of bovine milk oligosaccharides and determination of novel fucosylated structures. Glycobiology 23(6):664-76.
  • Barile D., Rastall R. (2013). Human milk and related oligosaccharides as prebiotics. Current Opinion in Biotechnology 24:214-219.
  • Zivkovic, A. M., Z. T. Lewis, J. B. German and D. A. Mills. (2013). Establishment of a milk-oriented microbiota (MOM) in early life:  How babies meet their MOMs.  Functional Food Reviews 5:3-12.
  • Sela, D. A., Y. Li, L. Lerno, S. Wu, A. M. Marcobal, J. B. German, Xi Chen, C. B. Lebrilla and D. A. Mills. (2011). An infant-associated bacterial commensal utilizes breast milk sialyoligosaccharides.  Journal of Biological Chemistry 286:11909-11918.
  • Zivkovic, A., & Barile, D. (2011). Bovine Milk as a Source of Functional Oligosaccharides for Improving Human Health.  Advances in Nutrition 2(3): 284289.
  • Zivkovic, A., J. B. German, C. B. Lebrilla and D. A. Mills.  (2011). The human milk glycobiome and its impact on the infant microbiota.  Proceedings in the National Academy of Sciences 108:4653-4658.
  • Chichlowski, M., J. B. German, C. B. Lebrilla and D. A. Mills. (2011). The influence of milk oligosaccharides on the microbiota of infants:  Opportunities for formulas.  Annual Reviews in Food Science and Technology 3:331-351.
  • Marcobal, A., M. Barboza, J. Froehlich, D. E. Block, J. B. German, C. B. Lebrilla and D. A. Mills.  (2010). Consumption of human milk oligosaccahrides by gut-related microbes.  Journal of Agricultural and Food Chemistry 58:5334-40.
  • German, J.B, S. L. Freeman, C. B. Lebrilla, and D. A. Mills.  Human milk oligosaccharides: Evolution, structures and bioselectivity as substrates for intestinal bacteria.   (2008).  In Bier, D.M., J.B. German, and B. Lonnerdal Eds.  Personalized nutrition for the diverse needs of infants and children.  Karger, New York.